BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030G04SP1|AL429273
(878 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1336 1685 0.0
3x_Contig110 772 0.0
>3x_Contig1336
Length = 4880
Score = 1685 bits (847), Expect = 0.0
Identities = 869/877 (99%), Gaps = 2/877 (0%)
Strand = Plus / Minus
Query: 1 ctaactttttccgcttgaagattagttcgtattawattctaaaatgcacaaacaagtact 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 2257 ctaactttttccgcttgaagattagttcgtattaaattctaaaatgcacaaacaagtact 2198
Query: 61 aagaactcaattatcgatatgcacaaacaagtactaagaactcaattatcgatatgcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2197 aagaactcaattatcgatatgcacaaacaagtactaagaactcaattatcgatatgcaaa 2138
Query: 121 ctaatcttaccccttaatttcaaccggtacaaggactattcggctacctaacttcaatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2137 ctaatcttaccccttaatttcaaccggtacaaggactattcggctacctaacttcaatct 2078
Query: 181 tttcttaaatttcaatcaacaaattaatggatttgtttctcatcgctttctaaattttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2077 tttcttaaatttcaatcaacaaattaatggatttgtttctcatcgctttctaaattttgg 2018
Query: 241 aaaattttggctgaaaagaaaaagaaaaacttcaacaaaccttcgaaatttcaatgcgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2017 aaaattttggctgaaaagaaaaagaaaaacttcaacaaaccttcgaaatttcaatgcgat 1958
Query: 301 gaaagaaggaaacagagccaaaccatcaaactcgtccttcatgatttcagtcacgtgcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1957 gaaagaaggaaacagagccaaaccatcaaactcgtccttcatgatttcagtcacgtgcct 1898
Query: 361 gtcttgtgttggtatggaatgctctgagtcaagggcggcaggtgtagttctatgtttgta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1897 gtcttgtgttggtatggaatgctctgagtcaagggcggcaggtgtagttctatgtttgta 1838
Query: 421 tatatgtctatatwtagttatatatatatatatnganaagcctgggtgagaacttagtcw 480
||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 1837 tatatgtctatatttagttatatatatatatattgataagcctgggtgagaacttagtct 1778
Query: 481 cacagtctctcttaattttaagtcggtttacgtctatattcaagaacaatgtctgtgttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1777 cacagtctctcttaattttaagtcggtttacgtctatattcaagaacaatgtctgtgttt 1718
Query: 541 gatttccagtataaagtgcgtatagcactcagggtgatatcgttttctagtactgttcct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1717 gatttccagtataaagtgcgtatagcactcagggtgatatcgttttctagtactgttcct 1658
Query: 601 ttgcacaagatttctaaccattcgcttggatcttctttgtttttcatctcaggtgtcttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1657 ttgcacaagatttctaaccattcgcttggatcttctttgtttttcatctcaggtgtcttt 1598
Query: 661 gattcgaatctatccactatgtaagtcttgatcttttttgcctttatcatatttgcagct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1597 gattcgaatctatccactatgtaagtcttgatcttttttgcctttatcatatttgcagct 1538
Query: 721 gttaatctaacattgctatcgttaatcttcggtagcattaagggtgattcaggtggttta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1537 gttaatctaacattgctatcgttaatcttcggtagcattaagggtgattcaggtggttta 1478
Query: 781 gattttttgtgg-amcctgatcttttatgttctactactagtctttcagcctctggcgaa 839
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1477 gattttttgtggaaccctgatcttttatgttctactactagtctttcagcctctggcg-a 1419
Query: 840 ttgttgcgtttcctccgataaatgagcctcgtccttc 876
|||||||||||||||||||||||||||||||||||||
Sbjct: 1418 ttgttgcgtttcctccgataaatgagcctcgtccttc 1382
>3x_Contig110
Length = 1507
Score = 772 bits (388), Expect = 0.0
Identities = 420/430 (97%), Gaps = 2/430 (0%)
Strand = Plus / Plus
Query: 448 atatatnganaagcctgggtgagaacttagtcwcacagtctctcttaattttaagtcggt 507
|||||| || |||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 1054 atatattgataagcctgggtgagaacttagtctcacagtctctcggaattttaagtcggt 1113
Query: 508 ttacgtctatattcaagaacaatgtctgtgtttgatttccagtataaagtgcgtatagca 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1114 ttacgtctatattcaagaacaatgtctgtgtttgatttccagtataaagtgcgtatagca 1173
Query: 568 ctcagggtgatatcgttttctagtactgttcctttgcacaagatttctaaccattcgctt 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1174 ctcagggtgatatcgttttctagtactgttcctttgcacaagatttctaaccattcgctt 1233
Query: 628 ggatcttctttgtttttcatctcaggtgtctttgattcgaatctatccactatgtaagtc 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1234 ggatcttctttgtttttcatctcaggtgtctttgattcgaatctatccactatgtaagtc 1293
Query: 688 ttgatcttttttgcctttatcatatttgcagctgttaatctaacattgctatcgttaatc 747
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1294 ttgatctgttttgcctttatcatatttgcagctgttaatctaacattgctatcgttaatc 1353
Query: 748 ttcggtagcattaagggtgattcaggtggtttagattttttgtgg-amcctgatctttta 806
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 1354 ttcggtagcattaagggtgattcaggtggtttagattttttgtggaaccctgatctttta 1413
Query: 807 tgttctactactagtctttcagcctctggcgaattgttgcgtttcctccgataaatgagc 866
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 1414 tgttctactactagtctttcagcctctggcg-attgttgcgtttcctccaataaatgagc 1472
Query: 867 ctcgtccttc 876
||||||||||
Sbjct: 1473 ctcgtccttc 1482
Score = 310 bits (156), Expect = 2e-84
Identities = 359/426 (84%), Gaps = 1/426 (0%)
Strand = Plus / Plus
Query: 1 ctaactttttccgcttgaagattagttcgtattawattctaaaatgcacaaacaagtact 60
|||||||||||| ||| || |||| ||| ||||| |||||||||| ||||||||| |||
Sbjct: 606 ctaactttttcctcttaaaaattatttcttattaaattctaaaattcacaaacaatcact 665
Query: 61 aagaactcaattatcgatatgcacaaacaagtactaagaactcaattatcgatatgcaaa 120
|| |||||||||||| |||| ||||||||| ||||| |||||||||||| ||| ||||
Sbjct: 666 aataactcaattatctatattcacaaacaatcactaataactcaattatctatactcaaa 725
Query: 121 ctaatcttaccccttaatttcaaccggtacaaggactattcggctacctaacttcaatct 180
||| |||||||||| || ||||| ||||| ||||||| |||||||||||||||||
Sbjct: 726 ctattcttacccctaaaccccaacctttacaattactattcttctacctaacttcaatct 785
Query: 181 tttcttaaatttcaatcaacaaattaatggatttgtttctcatcgctttctaaattttgg 240
|||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||
Sbjct: 786 tttcttaaatttcaatcaacaaattaatttatttttttctcatctctttctaaatttttt 845
Query: 241 aaaattttggctgaaaagaaaaagaaaaacttcaacaaaccttcgaaatttcaatgcgat 300
|||||| | |||| ||||| ||||||||||||||||||||||||||||||||| ||
Sbjct: 846 aaaattccttcctaaaataaaaataaaaacttcaacaaaccttcgaaatttcaatgctat 905
Query: 301 gaaagaaggaaacagagc-caaaccatcaaactcgtccttcatgatttcagtcacgtgcc 359
||| || ||||| | | ||||||||||||||| |||||||| ||||||||||||| ||
Sbjct: 906 taaataattaaacaaaacacaaaccatcaaactcttccttcattatttcagtcacgtacc 965
Query: 360 tgtcttgtgttggtatggaatgctctgagtcaagggcggcaggtgtagttctatgtttgt 419
| ||||||||| |||| ||| |||| ||||||| || || |||| |||||||||| |
Sbjct: 966 tttcttgtgttagtataaaatactctcagtcaagcgcaacatatgtacttctatgttttt 1025
Query: 420 atatat 425
||||||
Sbjct: 1026 atatat 1031
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,574
Number of Sequences: 1807
Number of extensions: 11574
Number of successful extensions: 1062
Number of sequences better than 1.0e-20: 2
length of query: 878
length of database: 10,358,551
effective HSP length: 16
effective length of query: 862
effective length of database: 10,329,639
effective search space: 8904148818
effective search space used: 8904148818
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)